This work has been supported by EIT Health in the context of the european project COMETH (know more) leaded by Magali Richard and Yuna Blum and is part of the HADACA data challenges 2nd edition (know more) .

HADACA Consortium contributed to this work by proposing and implementing the baseline reference methods.

HADACA Consortium

Nicolas Alcala6, Alexis Arnaud2, Francisco Avila Cobos7, Luciana Batista8, Anne-Françoise Batto9, Yuna Blum3, Florent Chuffart10, Jérôme Cros5, Clémentine Decamps1, Lara Dirian11, Daria Doncevic12, Ghislain Durif13, Silvia Yahel Bahena Hernandez14, Milan Jakobi10, Rémy Jardillier15, Marine Jeanmougin16, Pau Jedynak10, Basile Jumentier1, Aliaksandra Kakoichankava17, Maria Kondili18, Jing Liu19, Tiago Maie20, Jules Marécaille11, Jane Merlevede21, Maxime Meylan3,22, Petr Nazarov23, Kapil Newar1, Karl Nyrén14, Florent Petitprez3, Claudio Novella Rausell14, Magali Richard1, Michael Scherer24, Nicolas Sompairac21, Katharina Waury14, Ting Xie25 & Markella-Achilleia Zacharouli14

Affiliations

1 Laboratory TIMC-IMAG, UMR 5525, Univ. Grenoble Alpes, CNRS, Grenoble, France.
2 Data Institute, Univ. Grenoble Alpes, Grenoble, France.
3 Programme Cartes d’Identité des Tumeurs (CIT), Ligue Nationale Contre le Cancer, Paris, France.
4 INSERM U1068 CRCM, Marseille, France.
5 Beaujon Hospital, Dpt of Pathology - Univ. Paris-INSERM U1149; Clichy, France.
6 Section of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France
7 Center for Medical Genetics Ghent, Department of Biomolecular Medicine, Ghent University, Ghent, Belgium.
8 Innate Pharma, Marseille, France
9 Equipe Cancer et Immunité- INSERM Centre de Recherche des Cordeliers, Paris, France
10 Institute for Advanced Biosciences, CNRS UMR 5309, Inserm, U1209, Univ. Grenoble Alpes, F-38700 Grenoble, France
11 Verteego, Paris, France
12 Health Data Science Unit, BioQuant Center and Medical Faculty Heidelberg
13 Université de Montpellier, CNRS, IMAG UMR 5149, Montpellier, France 14 Uppsala University, SE-751 05, Uppsala, Sweden
15 University Grenoble Alpes, CEA, INSERM, IRIG, Biology of Cancer Infection UMR_S 1036, 38000 Grenoble, France & University Grenoble Alpes, CNRS, Grenoble INP, GIPSA-lab, Institute of Engineering University Grenoble Alpes, 38000 Grenoble, France
16 Department of Molecular Oncology, Institute for Cancer Research, Oslo University Hospital, The Norwegian Radium Hospital - Oslo, Norway
17 Vitebsk State Medical University & NatiVita, Vitebsk, Belarus
18 Centre de Recherche de St.Antoine,Paris, AP-HP
19 Institut Curie, PSL Research University, Sorbonne Universités, UPMC Université Paris 06, CNRS, UMR144, Equipe Labellisée Ligue contre le Cancer, 75005 Paris, France
20 Institute for Computational Genomics, Joint Research Center for Computational Biomedicine, RWTH Aachen University Medical School, Aachen, Germany
21 Institut Curie, PSL Research University, Mines Paris Tech, Inserm, U900, F−75005, Paris, France
22 INSERM U1138 Centre de Recherche des Cordeliers, France
23 Quantitative Biology Unit, Luxembourg Institute of Health, L-1445 Strassen, Luxembourg
24 Department of Genetics/Epigenetics, Saarland University, Saarbrücken, Germany
25 Centre de Recherche en Cancérologie de Toulouse, Inserm UMR 1037, F-31037, Toulouse, France